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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'ABCA10'

Total of fusion sequences: 5 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
XM_017004150.1
13..607
100.0%
-
2

NM_080282.3
606..635
100.0%
+
17
1
0
0
exon-intron
Homo Sapiens
NM_080282.3
1..37
100.0%
-
17

XM_017000831.1
31..381
99.8%
+
1
1
0
0
intron-exon
Homo Sapiens LHFPL4
Q7Z7J7

NM_198560.2
75..319
96.3%
-
3

NM_080282.3
310..363
97.9%
-
17
1
0
0
intron-intron
Homo Sapiens
XM_011521664.2
1..536
99.9%
+
15

NM_080282.3
518..544
96.2%
+
17
1
0
0
exon-intron
Homo Sapiens
ENST00000522787
8..224
99.6%
-
17

ENST00000618553
211..230
100.0%
+
22
1
0
0
exon-intron

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