Result for the search of Gene Name/NCBI ID(s): '7431'

Total of fusion sequences: 62 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	ChimerDB BQ573942 ANNOTATION OF CHIMERA FUSION GenBank ID: BQ573942 FASTA Head Gene (1) Alignment: LOC107987267 Tail Gene (2) Alignment: VIM | OMIM: 193060 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 107987267 19 + 39942633 39943548 1 0 ncRNA 7431 10 - 17235253 17235364 4 1 tumor suppressor, protein-coding 711 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to HemY_N (PF07219, IPR010817) 107 266 323 1.3e-05 11.600 HemY protein N-terminus Updated: 2019-02-21 Owner: ChiTaRS	LOC107987267 XR_001753938.1	1..604 98.9%	+ 19	VIM A0A0S2Z4T0 A0A1B0GTT5 A0A1B0GVG8 B0YJC4 B0YJC5 P08670 V9HWE1 NM_003380.4	600..711 100.0%	- 10	1 0 0	intron-exon
2 Homo Sapiens	ChimerDB DA914166 ANNOTATION OF CHIMERA FUSION GenBank ID: DA914166 FASTA Head Gene (1) Alignment: KCNT1 | OMIM: 608167 Tail Gene (2) Alignment: VIM | OMIM: 193060 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 57582 9 + 135714432 135714459 1 0 protein-coding 7431 10 + 17229415 17229912 9 1 tumor suppressor, protein-coding 566 hg38 Updated: 2019-02-21 Owner: ChiTaRS	KCNT1 A0A0D9SEY3 A0A0D9SFC8 A0A0D9SFR1 A0A0K2GMW5 A0A0R4J2E0 A0A1B0GW26 A0A1B0GWC7 C9J9Y7 C9JAX7 C9JBV2 C9JYL2 F8WC49 Q5JUK3 XM_011518877.3	44..71 100.0%	+ 9	VIM A0A0S2Z4T0 A0A1B0GTT5 A0A1B0GVG8 B0YJC4 B0YJC5 P08670 V9HWE1 NM_003380.4	70..566 99.6%	+ 10	1 0 0	intron-exon
3 Homo Sapiens	ChimerDB AU120000 ANNOTATION OF CHIMERA FUSION GenBank ID: AU120000 FASTA Head Gene (1) Alignment: LRRC58 Tail Gene (2) Alignment: VIM | OMIM: 193060 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 116064 3 - 120325766 120325816 1 1 protein-coding 7431 10 + 17229277 17230710 9 1 tumor suppressor, protein-coding 841 hg38 Updated: 2019-01-25 Owner: ChiTaRS	LRRC58 Q96CX6 NM_001099678.1	1..51 100.0%	- 3	VIM A0A0S2Z4T0 A0A1B0GTT5 A0A1B0GVG8 B0YJC4 B0YJC5 P08670 V9HWE1 NM_003380.4	51..820 99.1%	+ 10	1 0 0	exon-exon
4 Homo Sapiens	BI495283 ANNOTATION OF CHIMERA FUSION GenBank ID: BI495283 FASTA Head Gene (1) Alignment: PET117 | OMIM: 614771 Tail Gene (2) Alignment: VIM | OMIM: 193060 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 100303755 20 - 18140816 18140837 1 0 protein-coding 7431 10 - 17235300 17237593 4 1 tumor suppressor, protein-coding 620 hg38 Updated: 2019-01-31 Owner: ChiTaRS	PET117 Q6UWS5 NM_001164811.1	18..39 100.0%	- 20	VIM A0A0S2Z4T0 A0A1B0GTT5 A0A1B0GVG8 B0YJC4 B0YJC5 P08670 V9HWE1 NM_003380.4	37..620 99.5%	- 10	1 0 0	intron-exon	1HiC Hi-C contacts of chimeric junction Fusion Gene1 chromo- some1 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo- some2 junction start2 junction end2 Hi-C point2 Δ2 Cell lines (Cell_ID,) PubMed(,s) 2 3 19 - - 32 - 8 25 - - 33 - 34 - BI495283 PET117 20 18140835 18140837 18139356 1479 VIM 10 17235300 17235302 17238001 2699 GM12878 (CVCL_7526), GM12878_Kyle 25497547
5 Homo Sapiens	BI495688 ANNOTATION OF CHIMERA FUSION GenBank ID: BI495688 FASTA Head Gene (1) Alignment: VIM | OMIM: 193060 Tail Gene (2) Alignment: MMD2 | OMIM: 614581 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 7431 10 + 17235844 17237591 10 1 tumor suppressor, protein-coding 100505381 7 - 4916372 4916752 3 0 protein-coding 521 hg38 Updated: 2019-02-17 Owner: ChiTaRS	VIM A0A0S2Z4T0 A0A1B0GTT5 A0A1B0GVG8 B0YJC4 B0YJC5 P08670 V9HWE1 NM_003380.4	12..504 99.8%	+ 10	MMD2 L0R6K8 Q8IY49 NR_072989.1	487..521 100.0%	- 7	0 0 1382	exon-intron
6 Homo Sapiens	BI492657 ANNOTATION OF CHIMERA FUSION GenBank ID: BI492657 FASTA Head Gene (1) Alignment: MMD2 | OMIM: 614581 Tail Gene (2) Alignment: VIM | OMIM: 193060 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 100505381 7 + 4916385 4916752 6 0 protein-coding 7431 10 - 17237335 17237592 1 1 tumor suppressor, protein-coding 281 hg38 Updated: 2019-02-17 Owner: ChiTaRS	MMD2 L0R6K8 Q8IY49 NR_072989.1	1..35 100.0%	+ 7	VIM A0A0S2Z4T0 A0A1B0GTT5 A0A1B0GVG8 B0YJC4 B0YJC5 P08670 V9HWE1 NM_003380.4	17..274 99.7%	- 10	3 0 102	intron-exon
7 Homo Sapiens	AW022918 ANNOTATION OF CHIMERA FUSION GenBank ID: AW022918 FASTA Head Gene (1) Alignment: VIM | OMIM: 193060 Tail Gene (2) Alignment: MMD2 | OMIM: 614581 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 7431 10 + 17237233 17237592 10 1 tumor suppressor, protein-coding 221938 7 - 4916381 4916752 3 0 protein-coding 387 hg38 Updated: 2019-02-07 Owner: ChiTaRS	VIM A0A0S2Z4T0 A0A1B0GTT5 A0A1B0GVG8 B0YJC4 B0YJC5 P08670 V9HWE1 NM_003380.4	8..367 99.8%	+ 10	MMD2 L0R6K8 Q8IY49 NR_072989.1	349..387 100.0%	- 7	3 0 7	exon-intron
8 Homo Sapiens	AW022680 ANNOTATION OF CHIMERA FUSION GenBank ID: AW022680 FASTA Head Gene (1) Alignment: VIM | OMIM: 193060 Tail Gene (2) Alignment: MMD2 | OMIM: 614581 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 7431 10 + 17237226 17237591 10 1 tumor suppressor, protein-coding 221938 7 - 4916372 4916752 3 0 protein-coding 399 hg38 Updated: 2019-02-07 Owner: ChiTaRS	VIM A0A0S2Z4T0 A0A1B0GTT5 A0A1B0GVG8 B0YJC4 B0YJC5 P08670 V9HWE1 NM_003380.4	13..378 100.0%	+ 10	MMD2 L0R6K8 Q8IY49 NR_072989.1	361..399 100.0%	- 7	3 0 7	exon-intron
9 Homo Sapiens	BI495610 ANNOTATION OF CHIMERA FUSION GenBank ID: BI495610 FASTA Head Gene (1) Alignment: LOC653698 Tail Gene (2) Alignment: VIM | OMIM: 193060 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 653698 11 + 49433406 49433437 1 1 pseudo 7431 10 - 17237330 17237594 1 1 tumor suppressor, protein-coding 294 hg38 Updated: 2019-02-17 Owner: ChiTaRS	LOC653698	1..32 100.0%	+ 11	VIM A0A0S2Z4T0 A0A1B0GTT5 A0A1B0GVG8 B0YJC4 B0YJC5 P08670 V9HWE1 NM_003380.4	23..287 99.3%	- 10	3 0 5	exon-exon
10 Homo Sapiens	BM153580 ANNOTATION OF CHIMERA FUSION GenBank ID: BM153580 FASTA Head Gene (1) Alignment: LOC653698 Tail Gene (2) Alignment: VIM | OMIM: 193060 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 653698 11 + 49433412 49433437 1 1 pseudo 7431 10 - 17235867 17237594 3 1 tumor suppressor, protein-coding 492 hg38 Updated: 2019-02-25 Owner: ChiTaRS	LOC653698	1..26 100.0%	+ 11	VIM A0A0S2Z4T0 A0A1B0GTT5 A0A1B0GVG8 B0YJC4 B0YJC5 P08670 V9HWE1 NM_003380.4	17..492 98.8%	- 10	3 0 1	exon-exon

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