Search Database Collection

Result for the search: Gene Name/NCBI ID(s): '60,60'

Total of fusion sequences: 5 (from 821,404 parsed EST/mRNAs. Last update 2019-04-20)

Organism	Fusion: Graphical View, Annotation, PPI	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed, iHOP reference
		Name(s)1	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,17	8	9,10,11	12,25	13,14,15	16	17
Homo Sapiens	BG258572 ANNOTATION OF CHIMERA FUSION GenBank ID: BG258572 FASTA Head Gene (1) Alignment: ACTB | OMIM: 102630 Tail Gene (2) Alignment: ACTB | OMIM: 102630 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 60 7 + 5529562 5530567 4 2 oncogene 60 7 - 5528418 5529582 13 1 oncogene 775 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Actin (PF00022, IPR004000, SM00268) 407 51 204 4.9e-41 126.700 Actin Updated: 2016-09-30 Owner: ChiTaRS	ACTB A0AUL6 C9JTX5 C9JUM1 C9JZR7 E7EVS6 G5E9R0 G8FSY7 P60709 Q1KLZ0 Q9UMN3	16..159 99.4%	+ 7	ACTB A0AUL6 C9JTX5 C9JUM1 C9JZR7 E7EVS6 G5E9R0 G8FSY7 P60709 Q1KLZ0 Q9UMN3	158..737 98.8%	- 7	0 1716 1693	HS110
Homo Sapiens	AW021512 ANNOTATION OF CHIMERA FUSION GenBank ID: AW021512 FASTA Head Gene (1) Alignment: ACTB | OMIM: 102630 Tail Gene (2) Alignment: ACTB | OMIM: 102630 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 60 7 - 5527386 5527414 1 1 oncogene 60 7 + 5527414 5528013 3 1 oncogene 521 hg38 Updated: 2018-11-17 Owner: ChiTaRS	ACTB A0AUL6 C9JTX5 C9JUM1 C9JZR7 E7EVS6 G5E9R0 G8FSY7 P60709 Q1KLZ0 Q9UMN3	8..36 100.0%	- 7	ACTB A0AUL6 C9JTX5 C9JUM1 C9JZR7 E7EVS6 G5E9R0 G8FSY7 P60709 Q1KLZ0 Q9UMN3	35..521 99.8%	+ 7	3 599 28
Homo Sapiens	BI019850 ANNOTATION OF CHIMERA FUSION GenBank ID: BI019850 FASTA Head Gene (1) Alignment: ACTB | OMIM: 102630 Tail Gene (2) Alignment: ACTB | OMIM: 102630 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 60 7 + 5567982 5568158 NA NA oncogene 60 7 + 5567767 5568066 NA NA oncogene NA hg19 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Actin (PF00022, IPR004000, SM00268) 407 2 268 3.2e-90 288.700 Actin Updated: 2012-12-12 Owner: ChiTaRS	ACTB A0AUL6 C9JTX5 C9JUM1 C9JZR7 E7EVS6 G5E9R0 G8FSY7 P60709 Q1KLZ0 Q9UMN3	8..184 100.0%	+ 7	ACTB A0AUL6 C9JTX5 C9JUM1 C9JZR7 E7EVS6 G5E9R0 G8FSY7 P60709 Q1KLZ0 Q9UMN3	167..360 96.4%	+ 7	0 38484 38420
Homo Sapiens	BI492472 ANNOTATION OF CHIMERA FUSION GenBank ID: BI492472 FASTA Head Gene (1) Alignment: ACTB | OMIM: 102630 Tail Gene (2) Alignment: ACTB | OMIM: 102630 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 60 7 - 5527414 5528030 3 1 oncogene 60 7 + 5527386 5527414 1 1 oncogene 539 hg38 Updated: 2018-11-03 Owner: ChiTaRS	ACTB A0AUL6 C9JTX5 C9JUM1 C9JZR7 E7EVS6 G5E9R0 G8FSY7 P60709 Q1KLZ0 Q9UMN3	2..505 99.7%	- 7	ACTB A0AUL6 C9JTX5 C9JUM1 C9JZR7 E7EVS6 G5E9R0 G8FSY7 P60709 Q1KLZ0 Q9UMN3	504..532 100.0%	+ 7	3 599 28
Homo Sapiens	CB219182 ANNOTATION OF CHIMERA FUSION GenBank ID: CB219182 FASTA Head Gene (1) Alignment: ACTB | OMIM: 102630 Tail Gene (2) Alignment: ACTB | OMIM: 102630 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 60 7 - 5527869 5528071 2 0 oncogene 60 7 + 5527727 5527866 1 0 oncogene 226 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Actin (PF00022, IPR004000, SM00268) 407 2 336 2.7e-128 414.000 Actin Updated: 2016-10-31 Owner: ChiTaRS	ACTB A0AUL6 C9JTX5 C9JUM1 C9JZR7 E7EVS6 G5E9R0 G8FSY7 P60709 Q1KLZ0 Q9UMN3	1..91 99.0%	- 7	ACTB A0AUL6 C9JTX5 C9JUM1 C9JZR7 E7EVS6 G5E9R0 G8FSY7 P60709 Q1KLZ0 Q9UMN3	87..226 100.0%	+ 7	3 147 483