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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): '60,60'

Total of fusion sequences: 7 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network 		Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y) 		Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences		 Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript		 Start1..End1
Ident1% 		Strand1
Chrom1 		Name(s)2,
transcript		 Start2..End2
Ident2% 		Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: BG258572 FASTA
Head Gene (1) Alignment: ACTB | OMIM: 102630 Tail Gene (2) Alignment: ACTB | OMIM: 102630 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
607+5529562553056761oncogene607-5528418552958241oncogene 775 hg38

Domains of the full fusion Envelope E-value Score Description
name (Pfam, InterPro, SMART) length from to
Actin (PF00022, IPR004000, SM00268) 407 51 204 4.9e-41 126.700 Actin
Updated: 2019-02-02
Owner: ChiTaRS
NM_001101.4		16..159
99.4%		+
7
NM_001101.4		158..737
98.8%		-
7		0
1146
1211		exon-exonHS110
2
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: AW021512 FASTA
Head Gene (1) Alignment: ACTB | OMIM: 102630 Tail Gene (2) Alignment: ACTB | OMIM: 102630 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
607-5527386552741411oncogene607+5527414552801361oncogene 521 hg38
Updated: 2019-02-01
Owner: ChiTaRS
NM_001101.4		8..36
100.0%		-
7
NM_001101.4		35..521
99.8%		+
7		5
599
28		exon-exon
3
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: CB219182 FASTA
Head Gene (1) Alignment: ACTB | OMIM: 102630 Tail Gene (2) Alignment: ACTB | OMIM: 102630 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
607-5527869552807121oncogene607+5527727552786661oncogene 226 hg38

Domains of the full fusion Envelope E-value Score Description
name (Pfam, InterPro, SMART) length from to
Actin (PF00022, IPR004000, SM00268) 407 2 336 2.7e-128 414.000 Actin
Updated: 2019-01-29
Owner: ChiTaRS
NM_001101.4		1..91
99.0%		-
7
NM_001101.4		87..226
100.0%		+
7		5
147
483		exon-exon
4
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: AA603870 FASTA
Head Gene (1) Alignment: ACTB | OMIM: 102630 Tail Gene (2) Alignment: ACTB | OMIM: 102630 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
607-5527688552772611oncogene607+5527716552838231oncogene 500 hg38
Updated: 2019-04-13
Owner: ChiTaRS
NM_001101.4		8..46
100.0%		-
7
NM_001101.4		44..500
98.9%		+
7		5
54
663		exon-exon
5
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: BI019850 FASTA
Head Gene (1) Alignment: ACTB | OMIM: 102630 Tail Gene (2) Alignment: ACTB | OMIM: 102630 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
607+5528351552852731oncogene607+5528136552843651oncogene 440 hg38

Domains of the full fusion Envelope E-value Score Description
name (Pfam, InterPro, SMART) length from to
Actin (PF00022, IPR004000, SM00268) 407 2 268 3.2e-90 288.700 Actin
Updated: 2019-02-22
Owner: ChiTaRS
NM_001101.4		8..184
100.0%		+
7
NM_001101.4		167..361
96.4%		+
7		5
54
663		exon-exon
6
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: BG576217 FASTA
Head Gene (1) Alignment: ACTB | OMIM: 102630 Tail Gene (2) Alignment: ACTB | OMIM: 102630 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
607+5527435552748811oncogene607-5527151552743811oncogene 391 hg38
Updated: 2019-06-06
Owner: ChiTaRS
NM_001101.4		13..66
98.2%		+
7
NM_001101.4		63..348
99.7%		-
7		5
24
21		exon-exon
7
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: BI492472 FASTA
Head Gene (1) Alignment: ACTB | OMIM: 102630 Tail Gene (2) Alignment: ACTB | OMIM: 102630 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
607-5527414552803021oncogene607+5527386552741461oncogene 539 hg38
Updated: 2019-01-31
Owner: ChiTaRS
NM_001101.4		2..505
99.7%		-
7
NM_001101.4		504..532
100.0%		+
7		5
24
21		exon-exon

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