Result for the search of Gene Name/NCBI ID(s): '1408,1408'

Total of fusion sequences: 3 (from 2,544,974 parsed EST/mRNAs. Last update 2020-03-27 15:38:11)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	W26687 ANNOTATION OF CHIMERA FUSION GenBank ID: W26687 FASTA Head Gene (1) Alignment: CRY2 | OMIM: 603732 Tail Gene (2) Alignment: CRY2 | OMIM: 603732 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1408 11 - 45881086 45881153 12 1 protein-coding 1408 11 + 45881566 45881934 1 1 protein-coding 572 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to DNA_photolyase (PF00875, IPR006050) 164 52 215 2.8e-51 159.900 DNA photolyase FAD_binding_7 (PF03441, IPR005101) 189 333 533 1.1e-71 226.500 FAD binding domain of DNA photolyase Updated: 2019-02-21 Owner: ChiTaRS	CRY2 A0A0D2X7Z3 A2I2P1 L8E920 Q49AN0 NM_001127457.2	14..81 97.1%	- 11	CRY2 A0A0D2X7Z3 A2I2P1 L8E920 Q49AN0 NM_001127457.2	80..449 98.1%	+ 11	0 8935 10705	exon-exon
2 Homo Sapiens	AW858937 ANNOTATION OF CHIMERA FUSION GenBank ID: AW858937 FASTA Head Gene (1) Alignment: CRY2 | OMIM: 603732 Tail Gene (2) Alignment: CRY2 | OMIM: 603732 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1408 11 - 45867259 45867827 6 0 protein-coding 1408 11 - 45872729 45872803 1 0 protein-coding 652 hg38 Updated: 2019-02-20 Owner: ChiTaRS	CRY2 A0A0D2X7Z3 A2I2P1 L8E920 Q49AN0 NM_001127457.2	13..584 97.9%	- 11	CRY2 A0A0D2X7Z3 A2I2P1 L8E920 Q49AN0 NM_001127457.2	580..652 100.0%	- 11	0 4391 1868	intron-intron
3 Homo Sapiens	BI004402 ANNOTATION OF CHIMERA FUSION GenBank ID: BI004402 FASTA Head Gene (1) Alignment: CRY2 | OMIM: 603732 Tail Gene (2) Alignment: CRY2 | OMIM: 603732 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1408 11 + 45870861 45872171 11 1 protein-coding 1408 11 - 45872157 45872218 2 1 protein-coding 206 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to DNA_photolyase (PF00875, IPR006050) 164 45 208 9.3e-52 161.500 DNA photolyase FAD_binding_7 (PF03441, IPR005101) 189 326 526 3.2e-72 228.200 FAD binding domain of DNA photolyase Updated: 2019-02-21 Owner: ChiTaRS	CRY2 A0A0D2X7Z3 A2I2P1 L8E920 Q49AN0 NM_001127457.2	1..147 100.0%	+ 11	CRY2 A0A0D2X7Z3 A2I2P1 L8E920 Q49AN0 NM_001127457.2	145..206 100.0%	- 11	0 4391 1868	exon-exon

T O P