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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'TSPAN9'

Total of fusion sequences: 23 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB
XM_011520912.3
19..104
100.0%
+
12

XM_017027186.1
98..508
99.8%
+
19
1
0
0
intron-exon
Homo Sapiens ChimerDB
XM_011520912.3
32..114
100.0%
+
12
MAML1
Q92585

NM_014757.4
106..445
100.0%
-
5
1
0
0
intron-exon
Homo Sapiens RPS27P3 1..5
98.8%
-
12

XM_011520912.3
6..249
98.8%
-
12
2
221
221
exon-intron
Homo Sapiens
NM_001160408.1
4..32
96.1%
+
12

XM_011520912.3
33..88
96.1%
+
12
1
0
0
intron-intron
Homo Sapiens
XM_011520912.3
2..56
97.5%
-
12

XM_011537537.1
17..584
99.0%
+
5
1
0
0
intron-exon
Homo Sapiens
XM_011520912.3
1..71
95.8%
+
12

XM_011520913.3
62..302
98.4%
-
12
1
0
0
intron-intron
Homo Sapiens
NM_001102445.2
10..1795
100.0%
+
1

XM_011520913.3
1794..1869
98.7%
-
12
1
0
0
exon-intron
Homo Sapiens RPS27P3 1..312
99.8%
-
12

XM_011520912.3
313..335
99.8%
-
12
2
221
221
exon-intron
Homo Sapiens LOC105377043
XR_001740664.1
1..353
98.1%
+
3

XM_011520913.3
3..364
97.5%
-
12
2
16
13
intron-intron
Homo Sapiens LOC105377043
XR_001740665.1
1..345
98.3%
+
3

XM_011520912.3
7..352
98.0%
-
12
2
16
13
intron-intron

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