Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'TMPO'

Total of fusion sequences: 13 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
NM_003276.2
6..211
98.6%
-
12

NM_006409.3
207..636
98.9%
+
7
3
23
0
exon-exon
Homo Sapiens
NM_003276.2
9..184
100.0%
-
12

NM_006409.3
180..571
99.8%
+
7
3
18
0
exon-exon
Homo Sapiens
NM_003276.2
4..157
98.0%
-
12

NM_006409.3
153..484
100.0%
+
7
3
18
0
exon-exon
Homo Sapiens
XR_001752457.2
10..515
100.0%
-
17

NM_001032283.2
440..534
97.2%
-
12
1
0
0
exon-intron
Homo Sapiens
NM_001032283.2
4..98
97.2%
+
12

XR_934429.3
23..528
100.0%
+
17
1
0
0
intron-exon
Homo Sapiens 1..332
97.9%
+
12
312..336
96.0%
+
18
1
0
0
intron-intron
Homo Sapiens
NM_006121.3
1..95
100.0%
+
12

NM_001032283.2
91..490
99.8%
-
12
1
0
0
exon-exon
Homo Sapiens
NM_001032283.2
3..28
100.0%
+
12

NM_014394.2
16..485
100.0%
+
10
1
0
0
intron-exon
Homo Sapiens LOC100132004
XR_001746457.1
1..24
100.0%
+
9

NM_003276.2
16..372
99.2%
-
12
1
0
0
intron-exon
Homo Sapiens
NM_003276.2
11..83
100.0%
+
12

NM_003276.2
79..226
97.3%
+
12
1
0
0
exon-exon

T o p