Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'SYP'

Total of fusion sequences: 6 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo SapiensSplGraphs
NM_003179.2
6..186
100.0%
-
X

NM_004615.3
187..810
98.8%
+
X
0
6385
0
exon-exon
Homo Sapiens ChimerDB
NM_003179.2
6..186
100.0%
-
X

NM_004615.3
187..730
99.9%
+
X
0
6385
0
exon-exon
Homo Sapiens ChimerDB
NM_003179.2
10..79
100.0%
-
X

NM_001871.2
77..655
100.0%
+
3
1
0
0
intron-exon
Homo Sapiens ChimerDB
NM_003179.2
1..213
99.1%
-
X

NM_001291722.1
213..478
99.3%
+
5
2
1
0
exon-exon
Homo Sapiens ChimerDB
NM_003179.2
1..212
100.0%
-
X

NM_001291722.1
212..409
98.5%
+
5
2
1
0
exon-exon
Homo Sapiens 47..70
95.9%
-
14
55..99
97.3%
+
X
1
0
0
intron-intron

T o p