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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Rp9'

Total of fusion sequences: 6 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_018739.2
148..734
100.0%
-
9

XM_006512252.2
714..744
100.0%
-
9
1
0
0
exon-exon
2
Mus musculus

NM_018739.2
65..172
98.2%
-
9
Samm50
Q8BGH2

NM_178614.4
157..188
96.5%
-
15
1
0
0
exon-intron
3
Mus musculus
Cdkl4
Q3TZA2

NM_001033443.4
8..33
100.0%
+
17

NM_018739.2
26..713
99.8%
+
9
1
0
0
intron-exon
4
Mus musculus

NM_018739.2
57..169
99.2%
-
9
Gm31306 148..176
100.0%
+
3
1
0
0
exon-intron
5
Mus musculus

XM_017320669.1
141..163
100.0%
+
5

NM_018739.2
159..707
98.2%
+
9
1
0
0
intron-exon
6
Mus musculus
Nat8
Q9JIY7

XM_006506535.3
17..51
100.0%
+
6

NM_018739.2
46..591
99.3%
+
9
1
0
0
intron-exon

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