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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'Paxip1'

Total of fusion sequences: 5 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Mus musculus
NM_018878.3
1..5054
100.0%
-
5

XM_006534210.3
4964..5071
95.3%
-
11
1
0
0
exon-intron
Mus musculus
NM_018878.3
27..479
99.8%
-
5

NM_134082.3
478..507
100.0%
-
14
1
0
0
exon-intron
Mus musculus
NM_018878.3
1..694
99.9%
-
5

NM_025887.4
692..713
100.0%
-
17
1
0
0
exon-intron
Mus musculus
NM_027727.2
1..22
100.0%
+
18

NM_018878.3
17..917
97.3%
+
5
1
0
0
intron-exon
Mus musculus
NM_018878.3
16..128
98.3%
+
5

XM_006526639.2
125..396
100.0%
+
19
1
0
0
exon-exon

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