Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'PCGF5'

Total of fusion sequences: 7 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo SapiensSplGraphs
NM_001228.4
1..1896
99.1%
+
2
PCGF5
Q86SE9

XM_011540271.3
1896..2500
98.7%
+
10
1
0
0
exon-exon
Homo Sapiens 6..25
100.0%
-
11
PCGF5
Q86SE9
9..506
99.8%
+
10
1
0
0
intron-intron
Homo Sapiens PCGF5
Q86SE9

NM_001257101.1
1..25
100.0%
-
10
PAXIP1-AS2
NR_024476.1
11..541
99.9%
+
7
1
0
0
intron-intron
Homo Sapiens PCGF5
Q86SE9

NM_001256549.1
54..321
95.5%
+
10

XR_001736963.2
238..355
95.4%
+
1
1
0
0
intron-intron
Homo Sapiens
XM_024446693.1
8..352
100.0%
-
7
PCGF5
Q86SE9

XM_011540271.3
338..365
100.0%
+
10
1
0
0
exon-intron
Homo Sapiens PCGF5
Q86SE9

NM_001256549.1
1..503
99.5%
+
10

XM_011544115.2
495..517
100.0%
+
1
1
0
0
exon-intron
Homo Sapiens
XM_011517264.2
14..156
100.0%
+
8
PCGF5
Q86SE9

XM_011540271.3
148..488
99.2%
+
10
1
0
0
intron-intron

T o p