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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'PCBP2'

Total of fusion sequences: 28 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
NM_031989.4
1..79
96.2%
+
12

XM_011542494.3
72..523
100.0%
-
1
2
0
8
exon-exon
2
Homo Sapiens

NM_001128912.1
8..50
100.0%
+
12

NM_001128912.1
43..498
99.8%
-
12
0
12188
11035
exon-exon
3
Homo Sapiens

NM_031989.4
1..366
97.6%
+
12

NM_031989.4
360..475
97.5%
-
12
2
209
870
intron-intron
4
Homo Sapiens

NM_031989.4
17..499
99.6%
-
12

NM_031989.4
493..665
99.5%
-
12
2
209
870
exon-intron
5
Homo Sapiens

NM_006301.3
1..219
95.9%
-
12

NM_031989.4
210..684
100.0%
+
12
1
0
0
exon-exon
6
Homo Sapiens
LOC105375904
XR_001745957.1
1..595
95.5%
-
8

NM_031989.4
15..608
99.7%
+
12
0
13704
535
intron-exon
7
Homo Sapiens

NM_001128912.1
5..80
100.0%
+
12
LOC105375904
XR_002956714.1
37..102
95.5%
-
8
0
13704
535
exon-intron
8
Homo Sapiens

NM_031989.4
12..98
96.6%
+
12

XM_011542494.3
91..1706
100.0%
-
1
2
0
8
exon-exon
9
Homo Sapiens

NM_031989.4
1..423
99.3%
+
12
AC009495.4
NA
421..451
100.0%
-
2
1
0
0
exon-intron
10
Homo Sapiens
SNX32
Q86XE0

XM_024448419.1
24..179
100.0%
+
11

NM_001128912.1
176..514
100.0%
-
12
1
0
0
exon-exon

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