Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'MCM5'

Total of fusion sequences: 30 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
NM_016653.2
19..657
99.0%
+
2

XM_006724242.4
654..675
100.0%
+
22
1
0
0
exon-intron
Homo Sapiens
NM_001142299.1
39..448
97.3%
+
5

XM_006724242.4
447..467
100.0%
+
22
1
0
0
exon-intron
Homo Sapiens
XM_006724242.4
9..377
99.8%
+
22

NM_199170.2
377..423
100.0%
-
20
1
0
0
intron-exon
Homo Sapiens
XM_005264317.3
1..37
97.3%
-
2

NM_006739.3
33..256
99.6%
-
22
1
0
0
intron-exon
Homo Sapiens
NR_147845.1
1..401
100.0%
-
16

XM_006724242.4
402..434
97.0%
-
22
1
0
0
exon-intron
Homo Sapiens
NM_006739.3
165..188
100.0%
-
22

NR_033441.1
189..432
98.8%
+
6
1
0
0
intron-exon
Homo Sapiens
NM_006739.3
159..182
100.0%
-
22

NR_033441.1
183..470
99.7%
+
6
1
0
0
intron-exon
Homo Sapiens SMG5
Q9UPR3

NM_001323616.1
8..277
98.9%
-
1

XM_006724242.4
277..298
100.0%
+
22
1
0
0
exon-intron
Homo Sapiens
NM_001321111.1
1..325
98.5%
+
19

XM_006724242.4
321..842
98.9%
-
22
1
0
0
exon-exon
Homo Sapiens
NM_001866.2
1..430
100.0%
+
X

XM_006724242.4
420..449
96.5%
+
22
1
0
0
exon-intron

T o p