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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'MAN2C1'

Total of fusion sequences: 8 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB RNA45S4
NR_145819.1
1..63
100.0%
+
21

XM_005254384.3
59..416
100.0%
-
15
1
0
0
exon-exon
2
Homo Sapiens

XM_005254384.3
1..4820
99.5%
-
15

NM_000990.4
4821..5455
97.7%
+
11
1
0
0
intron-intron
3
Homo Sapiens

XM_005254384.3
15..177
98.8%
-
15

XM_005254384.3
172..325
100.0%
-
15
1
0
0
exon-exon
4
Homo Sapiens
LINC00589
Q9BTQ3

ENST00000518623
289..472
95.1%
+
8

NM_006715.3
301..494
95.1%
+
15
1
0
0
intron-intron
5
Homo Sapiens

XM_011522003.3
1..1559
100.0%
+
15

XR_002957639.1
1332..3711
100.0%
+
15
0
0
0
exon-exon
6
Homo Sapiens

XM_011522003.3
1..1253
100.0%
+
15

XR_002957639.1
1026..3405
100.0%
+
15
0
0
0
exon-exon
7
Homo Sapiens

NM_014241.3
37..59
100.0%
-
10

NM_006715.3
53..248
99.0%
+
15
0
0
0
intron-exon
8
Homo Sapiens

XM_005254384.3
1..293
99.7%
+
15

XM_011518986.3
287..522
100.0%
+
9
1
0
0
exon-intron

T o p