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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'ITGB4'

Total of fusion sequences: 6 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo SapiensSplGraphs
XM_005257309.2
21..300
99.7%
+
17

XM_005246720.3
294..353
100.0%
-
2
1
0
0
exon-intron
Homo Sapiens ChimerDB
XM_006721866.3
13..78
100.0%
+
17
RP11-679C8.2 78..97
100.0%
+
4
1
0
0
exon-intron
Homo Sapiens ChimerDB
XM_005257309.2
19..165
98.7%
+
17
LOC112268284
XM_024452143.1
165..270
98.2%
-
21
1
0
0
exon-intron
Homo Sapiens
XM_005257309.2
61..326
98.5%
+
17

XM_017006629.1
327..436
99.1%
+
3
1
0
0
exon-exon
Homo Sapiens
NM_001324415.1
29..252
98.7%
+
16

XM_005257309.2
253..311
100.0%
+
17
1
0
0
exon-exon
Homo Sapiens
XM_006721866.3
1..337
99.2%
+
17
LOC102725238
XR_934763.1
334..356
100.0%
-
17
1
0
0
exon-intron

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