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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'IGBP1'

Total of fusion sequences: 7 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB IGBP1
P78318

XR_938398.1
1..110
99.1%
-
X

XR_922905.2
104..410
100.0%
-
2
1
0
0
exon-intron
Homo Sapiens ChimerDB
HLA-A

NM_002116.7
1..255
98.5%
+
6
IGBP1
P78318

XR_938398.1
251..312
98.4%
+
X
1
0
0
exon-exon
Homo Sapiens TRE-CTC1-6 3..68
98.5%
+
6
IGBP1
P78318

XR_938398.1
69..529
100.0%
+
X
1
0
0
exon-exon
Homo Sapiens IGBP1
P78318

XR_938398.1
28..767
99.5%
+
X

NM_147187.2
763..792
96.6%
-
8
1
0
0
exon-intron
Homo Sapiens SRP54-AS1
NR_151701.1
8..454
95.7%
+
14
IGBP1
P78318

NM_001551.2
450..509
100.0%
-
X
1
0
0
intron-exon
Homo Sapiens IGBP1
P78318

NM_001551.2
141..169
96.3%
+
X

XR_001738876.2
157..362
97.6%
+
2
1
0
0
intron-exon
Homo Sapiens LOC105370504
XR_001750971.2
11..43
100.0%
+
14
IGBP1
P78318

XR_938398.1
44..381
100.0%
-
X
1
0
0
intron-exon

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