Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'Hdac3'

Total of fusion sequences: 5 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Mus musculusSplGraphs
XM_011248292.2
1..331
100.0%
-
8

NM_010411.2
331..491
100.0%
-
18
1
0
0
exon-exon
Mus musculus
NM_010411.2
1..246
97.2%
-
18

NM_026406.3
246..330
97.0%
-
3
1
0
0
exon-intron
Mus musculus
XM_011248292.2
1..334
100.0%
-
8

NM_010411.2
334..508
100.0%
-
18
1
0
0
exon-exon
Mus musculus
ENSMUST00000143660
85..454
98.4%
-
18

NM_019919.3
449..473
100.0%
+
17
1
0
0
exon-intron
Mus musculus
XM_006507308.3
1..95
99.0%
-
7

NM_010411.2
95..787
98.9%
-
18
1
0
0
exon-exon

T o p