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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'Chd3'

Total of fusion sequences: 8 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Mus musculusSplGraphs
XM_006532882.1
1..3723
100.0%
-
11

XM_006532882.1
3717..4083
99.8%
-
11
1
0
0
exon-exon
Mus musculusSplGraphs
NM_007509.3
1..342
99.2%
+
8

XM_006532882.1
337..471
99.3%
-
11
1
0
0
exon-exon
Mus musculus 3110039I08Rik
Q3URL6

NR_040725.2
1..187
100.0%
+
9

XM_006532882.1
186..456
99.7%
-
11
3
0
5
intron-exon
Mus musculus 3110039I08Rik
Q3URL6

NR_040725.2
1..185
99.5%
+
9

XM_006532882.1
184..459
99.3%
-
11
3
0
5
intron-exon
Mus musculus 3110039I08Rik
Q3URL6

NR_040725.2
2..187
100.0%
+
9

XM_006532882.1
186..432
99.6%
-
11
3
0
24
intron-exon
Mus musculus
NM_009920.4
22..197
97.3%
+
19

XM_006532882.1
190..299
100.0%
-
11
1
0
0
exon-exon
Mus musculus
XM_006532882.1
1..133
100.0%
-
11
Erv3
Q9DAX3

XM_006500202.2
127..752
100.0%
-
2
1
0
0
intron-exon
Mus musculus
XM_006532882.1
22..280
99.3%
-
11

NM_009099.2
280..378
100.0%
+
7
1
0
0
exon-intron

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