Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'CHP1'

Total of fusion sequences: 17 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB
NM_015092.4
12..133
98.4%
-
16

NM_007236.4
128..865
96.6%
+
15
2
19
0
exon-exon
Homo Sapiens ChimerDB
NM_015092.4
1..103
100.0%
-
16

NM_007236.4
98..705
99.7%
+
15
2
19
0
exon-exon
Homo Sapiens ChimerDB PCAT7
NR_121566.2
2..901
100.0%
+
9

NM_007236.4
901..1661
99.9%
+
15
1
0
0
exon-exon
Homo Sapiens ChimerDB PCAT7
NR_121566.2
2..901
100.0%
+
9

NM_007236.4
901..1661
99.9%
+
15
1
0
0
exon-exon
Homo Sapiens ChimerDB PCAT7
NR_121566.2
2..901
100.0%
+
9

NM_007236.4
901..1661
99.9%
+
15
1
0
0
exon-exon
Homo Sapiens ChimerDB PCAT7
NR_121566.2
2..901
100.0%
+
9

NM_007236.4
901..1661
99.9%
+
15
1
0
0
exon-exon
Homo Sapiens ChimerDB
XM_024446133.1
1..1243
100.0%
-
5

NM_007236.4
1238..2001
100.0%
+
15
1
0
0
exon-exon
Homo Sapiens ChimerDB
NM_007236.4
65..265
95.2%
+
15
TCEAL2
Q9H3H9

NM_080390.3
263..679
99.3%
+
X
1
0
0
exon-exon
Homo Sapiens ChimerDB 1..275
99.7%
+
15
260..279
100.0%
+
10
1
0
0
intron-intron
Homo Sapiens ChimerDB
NM_001242800.1
21..2309
99.9%
-
19

NM_007236.4
2310..3111
99.8%
+
15
1
0
0
intron-exon

T o p