Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): '8452'

Total of fusion sequences: 8 (from 3,531,238 parsed EST/mRNAs. Last update 2020-07-10 14:21:01)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_000422.2
11..209
100.0%
-
17

XM_006712800.2
210..574
99.8%
-
2
1
0
0
exon-exon
2
Homo Sapiens
ChimerDB
XM_006712800.2
1..198
100.0%
-
2
PRRC1
Q96M27

NM_130809.4
194..767
98.1%
+
5
1
0
0
exon-exon
3
Homo Sapiens

NM_002630.3
123..316
100.0%
-
6

XM_011511996.2
300..374
97.0%
+
2
1
0
0
exon-intron
4
Homo Sapiens

NM_002630.3
127..320
100.0%
-
6

XM_011511996.2
304..354
97.1%
+
2
1
0
0
exon-intron
5
Homo Sapiens

XM_005261831.3
1..28
100.0%
-
22

XM_006712800.2
23..729
100.0%
+
2
1
0
0
intron-exon
6
Homo Sapiens

XM_006712800.2
1..326
99.7%
-
2

XM_017006168.2
324..377
96.3%
+
3
1
0
0
exon-intron
7
Homo Sapiens

XM_006712800.2
18..86
100.0%
+
2

XM_006712800.2
85..370
100.0%
-
2
1
0
0
exon-exon
8
Homo Sapiens

XM_006712800.2
8..449
96.6%
-
2

NM_001282180.2
450..471
100.0%
+
14
1
0
0
intron-exon

T O P