Result for the search of Gene Name/NCBI ID(s): '5451'

Total of fusion sequences: 9 (from 2,544,974 parsed EST/mRNAs. Last update 2020-03-27 15:38:11)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	SplGraphs DA348770 ANNOTATION OF CHIMERA FUSION GenBank ID: DA348770 FASTA Head Gene (1) Alignment: POU2F1 | OMIM: 164175 Tail Gene (2) Alignment: LOC101928882 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5451 1 + 167220876 167220960 1 0 protein-coding 101928882 3 - 180773050 180773597 4 0 ncRNA 573 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to MTD (PF01993, IPR002844) 274 42 101 0.0004 5.800 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase BAAT_C (PF08840, IPR014940) 213 76 113 0.0004 6.500 BAAT / Acyl-CoA thioester hydrolase C terminal P12 (PF12669) 44 112 139 1.3e-05 11.900 Virus attachment protein p12 family PRP4 (PF08799, IPR014906) 29 134 144 0.036 0.000 pre-mRNA processing factor 4 (PRP4) like zf-RING_11 (PF17123, IPR001841) 29 164 185 3.2e-12 32.300 RING-like zinc finger zf-RING_2 (PF13639, IPR001841, SM00184) 44 286 330 8.1e-18 50.800 Ring finger domain STAC2_u1 (PF16664) 129 317 425 4.7e-05 10.100 Unstructured on SH3 and cysteine-rich domain-containing protein 2 DNA_ligase_ZBD (PF03119, IPR004149) 27 325 342 1.1e-05 11.800 NAD-dependent DNA ligase C4 zinc finger domain Updated: 2019-02-21 Owner: ChiTaRS	POU2F1 A0A024R8Y2 A0A0A0MSV5 A0A0A0MT46 A0A0C4DG88 A0A0P0GE07 A0A1X9FNI6 A0A345S7Y2 P14859 Q16075 XM_011509655.1	1..85 100.0%	+ 1	LOC101928882 NR_109986.1	85..573 95.0%	- 3	1 0 0	intron-intron
2 Homo Sapiens	ChimerDB AW590628 ANNOTATION OF CHIMERA FUSION GenBank ID: AW590628 FASTA Head Gene (1) Alignment: PSMD8 Tail Gene (2) Alignment: POU2F1 | OMIM: 164175 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5714 19 - 38383717 38383822 7 1 protein-coding 5451 1 - 167399186 167411987 5 1 protein-coding 542 hg38 Updated: 2019-01-29 Owner: ChiTaRS	PSMD8 K7EJC1 K7EJR3 K7EK21 K7ENY6 K7ERW6 P48556 R4GMR5 V9HW09 NM_002812.4	11..116 99.1%	- 19	POU2F1 A0A024R8Y2 A0A0A0MSV5 A0A0A0MT46 A0A0C4DG88 A0A0P0GE07 A0A1X9FNI6 A0A345S7Y2 P14859 Q16075 XM_011509655.1	112..425 99.1%	- 1	1 0 0	exon-exon
3 Homo Sapiens	SplGraphs DA179732 ANNOTATION OF CHIMERA FUSION GenBank ID: DA179732 FASTA Head Gene (1) Alignment: POU2F1 | OMIM: 164175 Tail Gene (2) Alignment: POU2F1 | OMIM: 164175 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5451 1 + 167417522 167417815 17 1 protein-coding 5451 1 + 167329043 167329231 16 0 protein-coding 483 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to DUF3597 (PF12200, IPR022016) 128 307 382 0.0007 6.400 Domain of unknown function (DUF3597) Pou (PF00157, IPR000327, SM00352) 72 471 542 4.5e-41 125.100 Pou domain - N-terminal to homeobox domain Homeobox (PF00046, IPR001356, SM00389) 57 568 624 3.1e-20 58.100 Homeobox domain Updated: 2019-02-21 Owner: ChiTaRS	POU2F1 A0A024R8Y2 A0A0A0MSV5 A0A0A0MT46 A0A0C4DG88 A0A0P0GE07 A0A1X9FNI6 A0A345S7Y2 P14859 Q16075 NR_037163.1	1..294 100.0%	+ 1	POU2F1 A0A024R8Y2 A0A0A0MSV5 A0A0A0MT46 A0A0C4DG88 A0A0P0GE07 A0A1X9FNI6 A0A345S7Y2 P14859 Q16075 NM_001198783.1	295..483 100.0%	+ 1	1 0 0	exon-intron	1HiC Hi-C contacts of chimeric junction Fusion Gene1 chromo- some1 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo- some2 junction start2 junction end2 Hi-C point2 Δ2 Cell lines (Cell_ID,) PubMed(,s) 2 3 19 - - 32 - 8 25 - - 33 - 34 - DA179732 POU2F1 1 167417814 167417815 167410763 7051 POU2F1 1 167329043 167329044 167330763 1719 GM12878 (CVCL_7526) 25497547
4 Homo Sapiens	KF898917 ANNOTATION OF CHIMERA FUSION GenBank ID: KF898917 FASTA Head Gene (1) Alignment: SDCCAG8 | OMIM: 613524 Tail Gene (2) Alignment: POU2F1 | OMIM: 164175 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 10806 1 - 243432787 243432949 19 0 oncogene 5451 1 + 167323346 167323495 16 0 protein-coding 309 hg38 Updated: 2019-01-31 Owner: ChiTaRS	SDCCAG8 A0A024R5P5 A0A0C4DG71 A0A0G2JQM2 A0A0G2JR20 A0A0G2JR50 Q86SQ7 S4R323 NM_001350251.1	1..163 100.0%	- 1	POU2F1 A0A024R8Y2 A0A0A0MSV5 A0A0A0MT46 A0A0C4DG88 A0A0P0GE07 A0A1X9FNI6 A0A345S7Y2 P14859 Q16075 NM_001198783.1	160..309 100.0%	+ 1	1 0 0	intron-intron
5 Homo Sapiens	AV682212 ANNOTATION OF CHIMERA FUSION GenBank ID: AV682212 FASTA Head Gene (1) Alignment: FN1 | OMIM: 135600 Tail Gene (2) Alignment: POU2F1 | OMIM: 164175 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 2335 2 - 215360862 215361021 1 1 oncogene 5451 1 - 167311932 167312253 16 0 protein-coding 668 hg38 Updated: 2019-02-07 Owner: ChiTaRS	FN1 A0A024R462 A6YID2 A6YID3 A6YID4 A6YID5 A6YID6 A6YID7 B7ZLE5 H0Y4K8 H0Y7Z1 O95608 P02751 Q14327 Q14328 Q53S27 Q6PJE5 Q7L553 NM_001306129.1	1..160 100.0%	- 2	POU2F1 A0A024R8Y2 A0A0A0MSV5 A0A0A0MT46 A0A0C4DG88 A0A0P0GE07 A0A1X9FNI6 A0A345S7Y2 P14859 Q16075 XM_011509654.3	156..299 98.1%	- 1	1 0 0	exon-intron
6 Homo Sapiens	BI861730 ANNOTATION OF CHIMERA FUSION GenBank ID: BI861730 FASTA Head Gene (1) Alignment: UBE2L6 | OMIM: 603890 Tail Gene (2) Alignment: POU2F1 | OMIM: 164175 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 9246 11 - 57551662 57552477 1 1 protein-coding 5451 1 + 167392907 167392941 0 0 protein-coding 826 hg38 Updated: 2019-06-06 Owner: ChiTaRS	UBE2L6 E9PKW8 E9PQT7 O14933 NM_004223.4	1..814 98.8%	- 11	POU2F1 A0A024R8Y2 A0A0A0MSV5 A0A0A0MT46 A0A0C4DG88 A0A0P0GE07 A0A1X9FNI6 A0A345S7Y2 P14859 Q16075 XM_011509653.2	791..823 96.5%	+ 1	1 0 0	exon-intron
7 Homo Sapiens	BI859757 ANNOTATION OF CHIMERA FUSION GenBank ID: BI859757 FASTA Head Gene (1) Alignment: PPP1R11 | OMIM: 606670 Tail Gene (2) Alignment: POU2F1 | OMIM: 164175 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6992 6 + 30069840 30070333 1 1 protein-coding 5451 1 - 167311934 167312254 0 0 protein-coding 904 hg38 Updated: 2019-06-06 Owner: ChiTaRS	PPP1R11 A2BEK1 O60927 Q5SRK2 Q96QB5 XM_006715174.4	1..494 99.8%	+ 6	POU2F1 A0A024R8Y2 A0A0A0MSV5 A0A0A0MT46 A0A0C4DG88 A0A0P0GE07 A0A1X9FNI6 A0A345S7Y2 P14859 Q16075 XM_011509653.2	487..590 97.7%	- 1	1 0 0	exon-intron
8 Homo Sapiens	AX261716 ANNOTATION OF CHIMERA FUSION GenBank ID: AX261716 FASTA Head Gene (1) Alignment: H3F3A | OMIM: 601128 Tail Gene (2) Alignment: POU2F1 | OMIM: 164175 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 3020 1 + 226071364 226071528 4 1 oncogene 5451 1 - 167275023 167275054 17 0 protein-coding 179 hg38 Updated: 2019-02-17 Owner: ChiTaRS	H3F3A B4DEB1 P84243 NM_002107.4	1..165 98.8%	+ 1	POU2F1 A0A024R8Y2 A0A0A0MSV5 A0A0A0MT46 A0A0C4DG88 A0A0P0GE07 A0A1X9FNI6 A0A345S7Y2 P14859 Q16075 XM_011509654.3	148..179 96.7%	- 1	1 0 0	exon-intron
9 Homo Sapiens	N64266 ANNOTATION OF CHIMERA FUSION GenBank ID: N64266 FASTA Head Gene (1) Alignment: POU2F1 | OMIM: 164175 Tail Gene (2) Alignment: MKRN1 | OMIM: 607754 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 5451 1 - 167384637 167384725 9 0 protein-coding 23608 7 + 140453100 140453230 8 1 protein-coding 216 hg38 Updated: 2019-02-02 Owner: ChiTaRS	POU2F1 A0A024R8Y2 A0A0A0MSV5 A0A0A0MT46 A0A0C4DG88 A0A0P0GE07 A0A1X9FNI6 A0A345S7Y2 P14859 Q16075 XM_011509655.1	1..89 100.0%	- 1	MKRN1 A1L0W6 C9IY57 C9IZP5 C9J031 C9JYI0 C9JYX8 F8WAS8 F8WBJ4 F8WEY8 H7C4H5 H7C588 Q9UHC7 XM_011515998.1	86..216 100.0%	+ 7	1 0 0	intron-exon

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