Result for the search of Gene Name/NCBI ID(s): '4311'

Total of fusion sequences: 13 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	CB048067 ANNOTATION OF CHIMERA FUSION GenBank ID: CB048067 FASTA Head Gene (1) Alignment: RIOK1 Tail Gene (2) Alignment: MME | OMIM: 120520 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 83732 6 + 7412907 7417701 3 1 protein-coding 4311 3 + 155093854 155093882 0 0 oncogene, tumor suppressor 597 hg38 Updated: 2019-04-13 Owner: ChiTaRS	RIOK1 E9PFQ8 Q9BRS2 NM_001348194.1	10..569 100.0%	+ 6	MME A0A087WWM7 B7ZKY6 C9IYX7 C9J7X4 C9J9X7 C9JDZ3 C9JR96 L7Z660 L7ZC27 L8E8E1 P08473 Q3KQS6 NM_007287.2	568..591 100.0%	+ 3	1 0 0	exon-intron
2 Homo Sapiens	CB048066 ANNOTATION OF CHIMERA FUSION GenBank ID: CB048066 FASTA Head Gene (1) Alignment: MME | OMIM: 120520 Tail Gene (2) Alignment: RIOK1 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4311 3 - 155093854 155093882 0 0 oncogene, tumor suppressor 83732 6 - 7412907 7417701 3 1 protein-coding 600 hg38 Updated: 2019-04-13 Owner: ChiTaRS	MME A0A087WWM7 B7ZKY6 C9IYX7 C9J7X4 C9J9X7 C9JDZ3 C9JR96 L7Z660 L7ZC27 L8E8E1 P08473 Q3KQS6 NM_007287.2	10..33 100.0%	- 3	RIOK1 E9PFQ8 Q9BRS2 NM_001348194.1	32..591 100.0%	- 6	1 0 0	intron-exon
3 Homo Sapiens	BG033196 ANNOTATION OF CHIMERA FUSION GenBank ID: BG033196 FASTA Head Gene (1) Alignment: SDCBP | OMIM: 602217 Tail Gene (2) Alignment: MME | OMIM: 120520 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6386 8 + 58582521 58582858 1 1 protein-coding 4311 3 - 155012913 155087265 3 0 oncogene, tumor suppressor 646 hg38 Updated: 2019-06-06 Owner: ChiTaRS	SDCBP A0A024R7Z5 B4DHN5 E9PBU7 G5EA09 O00560 NM_001330537.1	1..337 99.8%	+ 8	MME A0A087WWM7 B7ZKY6 C9IYX7 C9J7X4 C9J9X7 C9JDZ3 C9JR96 L7Z660 L7ZC27 L8E8E1 P08473 Q3KQS6 NM_007287.2	337..405 98.6%	- 3	1 0 0	exon-intron
4 Homo Sapiens	BI493302 ANNOTATION OF CHIMERA FUSION GenBank ID: BI493302 FASTA Head Gene (1) Alignment: MME | OMIM: 120520 Tail Gene (2) Alignment: NBEA | OMIM: 604889 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4311 3 + 155182597 155183018 23 1 oncogene, tumor suppressor 26960 13 - 35099197 35099218 48 0 protein-coding 460 hg38 Updated: 2019-01-31 Owner: ChiTaRS	MME A0A087WWM7 B7ZKY6 C9IYX7 C9J7X4 C9J9X7 C9JDZ3 C9JR96 L7Z660 L7ZC27 L8E8E1 P08473 Q3KQS6 NM_001354642.1	1..422 99.6%	+ 3	NBEA A0A0D9SF28 F5GXV7 Q5T321 Q8NFP9 XM_017020544.1	418..439 100.0%	- 13	1 0 0	exon-intron
5 Homo Sapiens	AV681863 ANNOTATION OF CHIMERA FUSION GenBank ID: AV681863 FASTA Head Gene (1) Alignment: RPS13 | OMIM: 180476 Tail Gene (2) Alignment: MME | OMIM: 120520 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6207 11 - 17074389 17075613 3 1 protein-coding 4311 3 + 155030891 155030911 23 0 oncogene, tumor suppressor 436 hg38 Updated: 2019-02-07 Owner: ChiTaRS	RPS13 E9PS50 J3KMX5 P62277 NM_001017.2	47..385 96.8%	- 11	MME A0A087WWM7 B7ZKY6 C9IYX7 C9J7X4 C9J9X7 C9JDZ3 C9JR96 L7Z660 L7ZC27 L8E8E1 P08473 Q3KQS6 XM_011512857.2	382..402 100.0%	+ 3	1 0 0	exon-intron
6 Homo Sapiens	FN103014 ANNOTATION OF CHIMERA FUSION GenBank ID: FN103014 FASTA Head Gene (1) Alignment: CDKAL1 | OMIM: 611259 Tail Gene (2) Alignment: MME | OMIM: 120520 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 54901 6 - 20609772 20609799 5 0 protein-coding 4311 3 - 155049370 155049843 23 0 oncogene, tumor suppressor 99 hg38 Updated: 2019-02-08 Owner: ChiTaRS	CDKAL1 Q5VV42 XR_926266.2	66..93 100.0%	- 6	MME A0A087WWM7 B7ZKY6 C9IYX7 C9J7X4 C9J9X7 C9JDZ3 C9JR96 L7Z660 L7ZC27 L8E8E1 P08473 Q3KQS6 XM_011512857.2	74..99 100.0%	- 3	1 0 0	intron-intron
7 Homo Sapiens	BE247713 ANNOTATION OF CHIMERA FUSION GenBank ID: BE247713 FASTA Head Gene (1) Alignment: MME | OMIM: 120520 Tail Gene (2) Alignment: OLMALINC | OMIM: 616240 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4311 3 - 155110471 155110753 0 0 oncogene, tumor suppressor 90271 10 - 100409614 100409833 0 0 ncRNA 295 hg38 Updated: 2019-03-03 Owner: ChiTaRS	MME A0A087WWM7 B7ZKY6 C9IYX7 C9J7X4 C9J9X7 C9JDZ3 C9JR96 L7Z660 L7ZC27 L8E8E1 P08473 Q3KQS6 NM_007287.2	1..282 97.5%	- 3	OLMALINC ENST00000641799	269..295 100.0%	- 10	1 0 0	intron-intron
8 Homo Sapiens	BF342949 ANNOTATION OF CHIMERA FUSION GenBank ID: BF342949 FASTA Head Gene (1) Alignment: SDHAP2 Tail Gene (2) Alignment: MME | OMIM: 120520 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 727956 3 + 195737302 195737682 14 0 pseudo 4311 3 + 155067198 155067220 23 0 oncogene, tumor suppressor 384 hg38 Updated: 2019-01-10 Owner: ChiTaRS	SDHAP2 ENST00000445430	1..371 99.5%	+ 3	MME A0A087WWM7 B7ZKY6 C9IYX7 C9J7X4 C9J9X7 C9JDZ3 C9JR96 L7Z660 L7ZC27 L8E8E1 P08473 Q3KQS6 XM_011512857.2	359..381 100.0%	+ 3	1 0 0	intron-intron
9 Homo Sapiens	EC561872 ANNOTATION OF CHIMERA FUSION GenBank ID: EC561872 FASTA Head Gene (1) Alignment: MME | OMIM: 120520 Tail Gene (2) Alignment: ATAD1 | OMIM: 614452 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4311 3 + 155116694 155116761 1 1 oncogene, tumor suppressor 84896 10 + 87771359 87771799 0 0 protein-coding 80 hg38 Updated: 2019-03-25 Owner: ChiTaRS	MME A0A087WWM7 B7ZKY6 C9IYX7 C9J7X4 C9J9X7 C9JDZ3 C9JR96 L7Z660 L7ZC27 L8E8E1 P08473 Q3KQS6 NM_007287.2	1..65 100.0%	+ 3	ATAD1 Q8NBU5 NM_001321969.1	54..80 100.0%	+ 10	1 0 0	exon-intron
10 Homo Sapiens	CN417628 ANNOTATION OF CHIMERA FUSION GenBank ID: CN417628 FASTA Head Gene (1) Alignment: MME | OMIM: 120520 Tail Gene (2) Alignment: MME | OMIM: 120520 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4311 3 + 155180919 155181165 23 1 oncogene, tumor suppressor 4311 3 + 155147184 155168603 9 1 oncogene, tumor suppressor 714 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Peptidase_M13_N (PF05649, IPR008753) 374 119 523 1.6e-114 369.500 Peptidase family M13 Peptidase_M13 (PF01431, IPR018497) 205 583 789 4.6e-76 241.100 Peptidase family M13 Updated: 2019-02-21 Owner: ChiTaRS	MME A0A087WWM7 B7ZKY6 C9IYX7 C9J7X4 C9J9X7 C9JDZ3 C9JR96 L7Z660 L7ZC27 L8E8E1 P08473 Q3KQS6 NM_001354642.1	1..246 100.0%	+ 3	MME A0A087WWM7 B7ZKY6 C9IYX7 C9J7X4 C9J9X7 C9JDZ3 C9JR96 L7Z660 L7ZC27 L8E8E1 P08473 Q3KQS6 NM_001354642.1	244..679 100.0%	+ 3	1 0 0	exon-exon

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