Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): '25828'

Total of fusion sequences: 4 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB
XM_006724226.1
18..251
97.5%
+
22
DIAPH3
Q9NSV4

XR_002957478.1
246..478
99.2%
+
13
1
0
0
exon-exon
Homo Sapiens
XR_001755389.1
20..47
100.0%
+
22

NM_012473.3
29..455
98.4%
+
22
1
0
0
intron-exon
Homo Sapiens
XM_017029226.2
1..737
100.0%
-
X

XM_006724226.1
735..2014
100.0%
-
22
1
0
0
intron-exon
Homo Sapiens
XM_006724226.1
1..132
98.5%
+
22

XM_006724226.1
129..185
100.0%
-
22
1
0
0
exon-exon

T o p