Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): '23054'

Total of fusion sequences: 11 (from 3,568,812 parsed EST/mRNAs. Last update 2020-07-14 10:36:55)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_004339.3
2..488
100.0%
-
21

XM_017027740.2
485..602
99.2%
-
20
1
0
0
exon-exon
2
Homo Sapiens

NM_005044.4
1..45
97.4%
-
X

XM_017027740.2
14..90
95.2%
+
20
1
0
0
intron-intron
3
Homo Sapiens

XM_017027747.2
4..164
95.8%
-
20

XM_011523762.2
35..448
99.8%
-
17
1
0
0
intron-exon
4
Homo Sapiens

XR_001754214.2
9..177
100.0%
+
20

XM_017027740.2
172..271
100.0%
+
20
1
0
0
exon-exon
5
Homo Sapiens

XR_001754214.2
13..33
96.4%
-
20

XM_017014338.1
20..769
99.4%
-
9
1
0
0
intron-exon
6
Homo Sapiens

NM_020884.4
1..63
95.9%
-
20

ENST00000374796
64..120
95.9%
-
20
1
0
0
intron-intron
7
Homo Sapiens

NM_001282495.1
1..81
100.0%
-
20

XR_001754214.2
80..642
97.9%
-
20
1
0
0
exon-exon
8
Homo Sapiens

XM_017023352.2
1..212
99.6%
+
16

XR_001754214.2
210..400
100.0%
+
20
1
0
0
intron-exon
9
Homo Sapiens

XR_001754214.2
2..136
95.7%
-
20

NM_001346817.1
38..397
98.9%
-
6
1
0
0
intron-exon
10
Homo Sapiens

NM_000989.3
1..501
99.9%
-
8

ENST00000374796
502..521
100.0%
+
20
1
0
0
exon-intron

T O P