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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): '1642'

Total of fusion sequences: 15 (from 2,544,974 parsed EST/mRNAs. Last update 2020-03-27 15:38:11)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_001923.4
1..237
100.0%
-
11

XM_011533585.3
235..404
96.5%
-
3
1
0
0
exon-exon
2
Homo Sapiens
SplGraphs
NM_001923.4
2..300
98.0%
-
11
ZNF408
Q9H9D4

NM_024741.2
300..533
96.9%
+
11
1
0
0
intron-exon
3
Homo Sapiens
ChimerDB
XR_001747228.1
6..302
100.0%
+
10

NM_001923.4
299..487
100.0%
+
11
1
0
0
intron-exon
4
Homo Sapiens
ChimerDB
NM_001923.4
1..182
97.8%
-
11
MALAT1
NR_144568.1
174..411
96.7%
+
11
1
0
0
exon-exon
5
Homo Sapiens
ChimerDB
NM_001923.4
24..102
96.3%
+
11

NM_005866.3
97..444
95.4%
+
9
1
0
0
exon-exon
6
Homo Sapiens
ChimerDB 13..122
100.0%
-
14

NM_001923.4
115..226
98.3%
-
11
1
0
0
exon-exon
7
Homo Sapiens

NM_001923.4
8..227
99.1%
-
11

NM_001923.4
224..253
100.0%
+
11
1
0
0
exon-exon
8
Homo Sapiens

NM_001923.4
9..76
100.0%
+
11

NM_001923.4
73..467
100.0%
-
11
1
0
0
exon-exon
9
Homo Sapiens

NM_001923.4
9..76
100.0%
+
11

NM_001923.4
73..492
100.0%
-
11
1
0
0
exon-exon
10
Homo Sapiens

NM_001923.4
6..35
100.0%
-
11

NM_001923.4
32..251
99.6%
+
11
1
0
0
exon-exon

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