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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): '1385'

Total of fusion sequences: 5 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network 		Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y) 		Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences		 Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript		 Start1..End1
Ident1% 		Strand1
Chrom1 		Name(s)2,
transcript		 Start2..End2
Ident2% 		Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: X55545 FASTA
UniProtKB: P16220 Cyclic AMP-responsive element-binding protein 1 (CREB-1) (cAMP-responsive element-binding protein 1)
Fusion Gene(s): CREB1
Head Gene (1) Alignment: CREB1 | OMIM: 123810 Tail Gene (2) Alignment: CREB1 | OMIM: 123810 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
13852+207530008207597074111oncogene,
protein-coding		13852+20757029420757032161oncogene,
protein-coding		 1266 hg38

Domains of the full fusion Envelope E-value Score Description
name (Pfam, InterPro, SMART) length from to
DUF4988 (PF16378, IPR032149) 179 124 171 0.0099 1.600 Domain of unknown function
pKID (PF02173, IPR003102) 41 160 200 3.5e-25 73.600 pKID domain
bZIP_1 (PF00170, IPR004827) 64 328 387 1.2e-22 66.100 bZIP transcription factor
Updated: 2019-02-17
Owner: ChiTaRS
XR_241290.2		9..1183
100.0%		+
2
XR_241290.2		1184..1211
100.0%		+
2		1
0
0		exon-exon
2
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: AA092330 FASTA
Head Gene (1) Alignment: METTL21A | OMIM: 615257 Tail Gene (2) Alignment: CREB1 | OMIM: 123810 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
1511942-20759747420759758720oncogene,
protein-coding		13852+20759758920759776211oncogene,
protein-coding		 302 hg38

Domains of the full fusion Envelope E-value Score Description
name (Pfam, InterPro, SMART) length from to
pKID (PF02173, IPR003102) 41 196 236 2e-24 71.100 pKID domain
bZIP_1 (PF00170, IPR004827) 64 364 423 7.4e-22 63.600 bZIP transcription factor
Updated: 2019-02-20
Owner: ChiTaRS
NM_001308021.2		2..115
100.0%		-
2
XR_241290.2		104..271
98.8%		+
2		1
0
0		intron-exon
3
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: AV710298 FASTA
Head Gene (1) Alignment: MOGS | OMIM: 601336 Tail Gene (2) Alignment: CREB1 | OMIM: 123810 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
78412-744610707446152311protein-coding13852-20757623220757628140oncogene,
protein-coding		 627 hg38
Updated: 2019-02-07
Owner: ChiTaRS
NM_001146158.1		1..454
100.0%		-
2
XR_241290.2		437..480
97.5%		-
2		1
0
0		exon-intron
4
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: BP432088 FASTA
Head Gene (1) Alignment: MCM3AP | OMIM: 603294 Tail Gene (2) Alignment: CREB1 | OMIM: 123810 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
888821+462708424627134900protein-coding13852+20758135320758171211oncogene,
protein-coding		 380 hg38
Updated: 2019-03-30
Owner: ChiTaRS
XM_005261204.5		1..27
100.0%		+
21
XM_017003399.2		21..380
99.8%		+
2		1
0
0		intron-exon
5
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: AW608328 FASTA
Head Gene (1) Alignment: CREB1 | OMIM: 123810 Tail Gene (2) Alignment: HSP90B1 | OMIM: 191175 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
13852+20760304620760318511oncogene,
protein-coding		718412-10394663010394765341oncogene,
tumor suppressor,
protein-coding		 498 hg38
Updated: 2019-11-28
Owner: ChiTaRS
XR_241290.2		1..139
96.4%		+
2
NM_003299.2		132..495
99.5%		-
12		1
0
0		exon-exon

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