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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): '1290'

Total of fusion sequences: 14 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
XM_005249785.2
9..163
100.0%
+
7

XM_011510573.3
164..510
100.0%
+
2
1
0
0
exon-exon
2
Homo Sapiens

NM_000393.4
1..4056
99.9%
-
2
LOC105379720
XR_002956541.1
4043..4077
100.0%
+
7
1
0
0
exon-intron
3
Homo Sapiens

XM_011510573.3
8..82
100.0%
+
2

XM_011510573.3
71..434
99.8%
-
2
1
0
0
exon-exon
4
Homo Sapiens

NM_022373.4
13..36
100.0%
-
7

NM_000393.4
22..135
99.2%
-
2
1
0
0
exon-exon
5
Homo Sapiens
LINC01090
ENST00000632331
1..119
100.0%
-
2

NM_000393.4
120..614
98.0%
+
2
1
0
0
intron-intron
6
Homo Sapiens

XM_011510573.3
8..476
100.0%
-
2
SLMO2-ATP5E
NR_037929.1
477..497
100.0%
+
20
1
0
0
exon-intron
7
Homo Sapiens
LOC105372288
NR_134908.1
1..25
100.0%
-
19

NM_000393.4
19..487
99.8%
+
2
1
0
0
intron-exon
8
Homo Sapiens

XR_001752594.1
14..204
99.5%
-
17

XM_011510573.3
198..293
100.0%
-
2
1
0
0
exon-exon
9
Homo Sapiens

NM_000393.4
1..566
99.9%
+
2
LOC105378336
XR_946020.2
566..635
100.0%
-
10
1
0
0
intron-intron
10
Homo Sapiens
LSM6
P62312

XR_001741098.1
1..147
97.7%
+
4

XM_011510573.3
24..600
99.9%
+
2
1
0
0
intron-exon

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