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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): '1182'

Total of fusion sequences: 7 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB
NM_173872.3
1..92
100.0%
+
4
SMNDC1
O75940

XM_005269382.3
88..449
98.1%
-
10
1
0
0
exon-exonBREAKPOINTs
24564548
Homo Sapiens
NM_173872.3
2..67
100.0%
-
4

NM_173872.3
58..3945
99.9%
+
4
0
685
65535
exon-exon
Homo Sapiens
NM_173872.3
1..94
100.0%
+
4

NM_173872.3
87..233
99.4%
-
4
1
0
0
exon-exon
Homo Sapiens
NM_173872.3
1..94
100.0%
+
4

NM_173872.3
87..233
99.4%
-
4
1
0
0
exon-exon
Homo Sapiens
NM_173872.3
1..131
100.0%
-
4
RP11-430H10.4 130..153
100.0%
-
11
1
0
0
exon-intron
Homo Sapiens
NM_173872.3
8..555
100.0%
-
4

NM_004555.3
542..668
98.4%
-
16
1
0
0
exon-exon
Homo Sapiens
NM_173872.3
2..30
100.0%
+
4

XM_005255318.1
9..162
100.0%
+
16
1
0
0
intron-intron

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