Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Sense-ANTIsense

Read-through Chimeras Mass-spec Hits Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: ChiTaRS Full Collection:

Total of fusion sequences: 33869 (from 176,901 parsed EST/mRNAs. Last update 2018-02-10)

Organism Fusion:
Graphical View,
Annotation, PPI
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed, iHOP
reference
Name(s)1 Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2 Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1789,10,1112,2513,14,151617
Homo SapiensSplGraphs 1..98
99.0%
+
20
94..890
98.9%
+
17
0
65535
65535
MCF7 BREAKPOINTs
12378525
17568001
19056696
Homo SapiensSplGraphs 8..74
100.0%
+
11
68..300
100.0%
-
2
1
0
0
MCF7
Homo SapiensSplGraphs 30..188
99.4%
-
5
189..253
100.0%
+
10
1
0
0
MCF7
Homo SapiensSplGraphs 2..1099
100.0%
+
14
1094..1155
100.0%
-
19
1
0
0
MCF7
Homo SapiensSplGraphs 1..160
100.0%
+
17
155..620
100.0%
+
14
1
0
0
LNCAP
Homo SapiensSplGraphs 1..257
99.7%
-
11
256..305
98.0%
+
10
0
65535
6419
HS7 BREAKPOINTs
Homo SapiensSplGraphs RPS12
P25398
19..516
99.8%
+
6
515..565
100.0%
+
19
1
0
0
HS66
Homo SapiensSplGraphs 2..948
100.0%
-
6
949..1818
100.0%
+
19
0
65535
65535
HS66
Homo SapiensSplGraphs
ATP6
1..102
99.1%
-
MT
99..312
99.6%
+
19
1
0
0
HS66
Homo SapiensSplGraphs 137..210
100.0%
+
3
211..403
97.4%
-
3
0
65535
65535
HS54